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Bioinformatricks - Nextflow for Bioinformatics -Trimming with fastp

Bioinformatics Coach 1,222 lượt xem 10 months ago
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Get the nextflow script here: https://www.patreon.com/posts/107475453

install nextflow: https://youtu.be/VKXzQxDoFf4

example data: https://github.com/vappiah/bioinformatics-tutorials/tree/main/datasets/fastq/paired-end
nextflow operators
overview: https://www.nextflow.io/docs/latest/operator.html
map: https://www.nextflow.io/docs/latest/operator.html#map
mix: https://www.nextflow.io/docs/latest/operator.html#mix
collect: https://www.nextflow.io/docs/latest/operator.html#collect
groupTuple:https://www.nextflow.io/docs/latest/operator.html#grouptuple

Nextflow read file pairs:https://youtu.be/6n8ARzfSgAM
How to Install conda: https://youtu.be/P7fjRe6u-F0
How to Install Mamba : https://youtu.be/0MmfR2dThvw


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